QSP Modeling: Design
- QSP models are designed to characterize biological systems, representing details such as disease pathophysiology, drug pharmacology, and pathways of toxicity
- Models typically depict interactions between drugs and the biological system of interest
- Software developed by DSSI built using systems of ODEs
- Systems treated as averaged “well-mixed tanks (or compartments)” across organs and body systems
- Mechanistic knowledge of interactions required, can combine with sparse data
- DSSI models currently designed in MATLAB environment
- Team investigating C++ and Julia simulation speeds
By Lara Clemens
Presented at SMB 2021 Annual Meeting June 13-17, 2021